STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07076.1Two-component response regulator (NarL subfamily). (309 aa)    
Predicted Functional Partners:
CCG09364.1
Sensor protein.
  
 
 0.860
CCG06665.1
Sensor protein.
  
 
 0.787
CCG08428.1
Sensor protein.
  
 
 0.787
CCG09263.1
Sensor protein.
  
 
 0.787
CCG07075.1
KaiB.
     
 0.783
CCG07073.1
Sensor protein.
     
 0.736
CCG08277.1
Sensor protein.
  
 
 0.729
CCG09501.1
Sensor protein.
  
 
 0.729
CCG07074.1
Circadian clock protein KaiC.
       0.705
CCG08293.1
Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain.
  
 
 0.644
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.