STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07099.1Putative uncharacterized protein. (164 aa)    
Predicted Functional Partners:
CCG07098.1
Glycosyl transferase, group 1.
       0.773
CCG08110.1
Putative uncharacterized protein.
  
     0.590
CCG06741.1
Putative uncharacterized protein.
  
     0.585
rpsU
30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
  
     0.568
CCG07532.1
Conserved hypothetical cytosolic protein.
  
     0.535
CCG07090.1
Putative uncharacterized protein.
  
     0.529
recF
DNA replication and repair protein recF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.
 
     0.524
lptD
Organic solvent tolerance protein OstA-like; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.503
CCG07502.1
DSBA oxidoreductase.
 
     0.502
CCG08764.1
Putative uncharacterized protein.
  
     0.492
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
Server load: low (20%) [HD]