STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07126.1HNH endonuclease. (218 aa)    
Predicted Functional Partners:
CCG07125.1
Glutamyl-tRNA synthetase, class Ic; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.724
CCG08231.1
TRAG protein.
   
 
 0.652
traG
Conjugal transfer protein.
   
 
 0.652
CCG09483.1
Phage terminase, small subunit, putative, P27.
  
    0.607
CCG07644.1
Putative uncharacterized protein.
  
  
 0.557
CCG09482.1
Putative terminase-like protein.
  
  
 0.557
CCG09729.1
Putative uncharacterized protein.
 
    0.555
CCG07369.1
DNA methylase N-4/N-6; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.513
CCG09639.1
Condensin subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
 
    0.499
CCG09595.1
Portal protein-like protein.
  
  
 0.490
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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