STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07133.1N-formylglutamate amidohydrolase. (326 aa)    
Predicted Functional Partners:
CCG07147.1
UPF0262 protein Rru_A2770; Belongs to the UPF0262 family.
 
     0.560
CCG07569.1
LSU ribosomal protein L7AE.
  
     0.473
CCG07235.1
Helicase-like.
  
     0.466
CCG07132.1
GCN5-related N-acetyltransferase.
       0.456
CCG06761.1
Putative uncharacterized protein.
 
     0.436
CCG08427.1
Double-transmembrane region-like.
  
     0.429
CCG09524.1
Putative uncharacterized protein.
  
     0.425
CCG09728.1
Protein containing DUF526.
  
     0.412
CCG06812.1
Transcriptional regulator, XRE family.
 
     0.411
CCG07288.1
GCN5-related N-acetyltransferase.
 
     0.403
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.