STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07142.1Mammalian cell entry related. (162 aa)    
Predicted Functional Partners:
CCG08047.1
Putative uncharacterized protein.
 
 0.990
CCG08046.1
ABC transporter component.
 
 0.986
CCG08685.1
Putative uncharacterized protein.
 
 0.984
CCG07143.1
Mammalian cell entry related.
 
  
 
0.981
CCG08686.1
ABC transporter component.
 
 0.969
CCG06879.1
Toluene tolerance.
 
 0.961
CCG08054.1
Toluene tolerance.
 
 0.949
CCG07144.1
NADH:ubiquinone oxidoreductase 17.2 kD subunit.
     
 0.819
CCG07141.1
Cellulase-like protein.
       0.815
CCG08055.1
VacJ-like lipoprotein.
 
   
 0.803
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.