STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbbR2RuBisCO operon transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (209 aa)    
Predicted Functional Partners:
cbbR2-2
RuBisCO operon transcriptional regulator.
     0.994
CCG08228.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.755
CCG09186.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.728
CCG07055.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.672
CCG08225.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.667
cbbL2
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
 
   
 0.662
ccbS2
Ribulose bisphosphate carboxylase, small subunit.
 
   
 0.628
CCG07392.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.595
cbbQ
CbbQ.
 
  
 0.594
cbbO
Rubisco activation protein CbbO, putative.
 
   
 0.582
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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