STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cckASensor protein. (473 aa)    
Predicted Functional Partners:
CCG08005.1
Sensor protein.
 
0.945
CCG06741.1
Putative uncharacterized protein.
     
  0.900
CCG08172.1
Sensor protein.
 
 
 0.828
CCG07769.1
Sensor protein.
 
 0.807
CCG09501.1
Sensor protein.
 
 0.794
CCG08577.1
Sensor protein.
 
 
 0.786
CCG07180.1
Response regulator receiver domain protein (CheY).
 
 
 0.781
CCG07174.1
Chemotaxis sensory transducer.
  
    0.776
CCG07061.1
Sensor protein.
 
 
 0.774
CCG08758.1
Sensor protein.
 
 
 0.774
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.