STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07201.1Phenylacetate--CoA ligase. (455 aa)    
Predicted Functional Partners:
CCG08290.1
Putative phenylacetate-CoA ligase.
  
  
 
0.927
CCG08038.1
Phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
  
  
 
0.912
CCG07199.1
NLPA lipoprotein.
  
    0.674
CCG08551.1
Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
    0.627
CCG08552.1
Pyruvate ferredoxin/flavodoxin oxidoreductase.
 
  
 0.571
CCG07390.1
Methylmalonate-semialdehyde dehydrogenase (Acylating).
  
 
 0.476
betB
Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.476
CCG07588.1
Aldehyde dehydrogenase (Acceptor).
  
 
 0.476
CCG07953.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.476
CCG07981.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.476
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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