STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07227.1Carbohydrate kinase, FGGY. (210 aa)    
Predicted Functional Partners:
CCG07228.1
Carbohydrate kinase, FGGY.
     0.994
glpK
Glycerol kinase.
 
     0.855
CCG08503.1
Mov34/MPN/PAD-1.
   
 0.854
CCG07563.1
Glycerophosphodiester phosphodiesterase.
 
  
 0.689
CCG06748.1
Peptidase S1C, Do; Belongs to the peptidase S1C family.
   
 0.577
CCG07505.1
Peptidase.
   
 0.577
CCG08328.1
Phosphoenolpyruvate--protein phosphotransferase.
     
 0.534
CCG08998.1
Ankrd17 protein.
   
 0.531
CCG09693.1
Ankyrin.
   
 0.531
CCG07229.1
Cold-shock DNA-binding protein family.
   
 
 0.496
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.