STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07292.1TRAP dicarboxylate transporter-DctP subunit. (338 aa)    
Predicted Functional Partners:
CCG08889.1
TRAP-type C4-dicarboxylate transport system,large permease component.
  
 0.970
CCG09515.1
TRAP-type C4-dicarboxylate transport system.
  
 0.886
CCG08890.1
Tripartite ATP-independent periplasmic transporter, DctQ component.
 
  
 0.873
CCG07293.1
Bacterial extracellular solute-binding protein,family 7.
 
    
0.770
CCG07294.1
Glycosyl transferase, family 25.
       0.513
CCG09514.1
Putative uncharacterized protein.
  
  
 0.458
CCG07480.1
TRAP-type mannitol/chloroaromatic compound transport system, large permease component.
   
 0.412
CCG08082.1
TRAP transporter solute receptor, TAXI family.
  
   
 0.404
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.