STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07324.1Two component, sigma54 specific, transcriptional regulator, Fis family. (471 aa)    
Predicted Functional Partners:
CCG08504.1
Two component, sigma54 specific, transcriptional regulator, Fis family.
  
  
 
0.906
CCG09818.1
Sigma-54 (RpoN); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.795
CCG08759.1
Substrate-binding protein of ABC transporter.
    
 0.686
CCG08584.1
Sensor protein.
 
 0.665
CCG09848.1
Hypothetical 1041 kDa protein in hypE 3'region.
  
 
 0.644
CCG06740.1
CheA Signal Transduction Histidine Kinases (STHK).
  
 
 0.642
cckA
Sensor protein.
 
 0.594
CCG08143.1
Cobyrinic acid a,c-diamide synthase.
  
 
 0.585
CCG08362.1
Sensor protein.
  
 
 0.581
CCG07572.1
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
  
 0.580
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.