STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07349.1Putative uncharacterized protein. (129 aa)    
Predicted Functional Partners:
CCG07348.1
Mu-like prophage FluMu I protein.
 
     0.953
CCG07346.1
Mu-like prophage FluMu protein gp29.
 
     0.874
CCG07347.1
Prophage F protein, putative.
 
     0.874
CCG07345.1
Putative uncharacterized protein.
 
     0.871
CCG07343.1
Putative uncharacterized protein.
 
     0.868
CCG09271.1
Mu-like prophage major head subunit gpT.
 
     0.802
CCG09268.1
Phage virion morphogenesis protein.
 
     0.801
CCG07339.1
Putative uncharacterized protein.
 
     0.792
CCG07337.1
Putative uncharacterized protein.
 
     0.784
CCG07334.1
Phage transposition protein B, putative.
 
     0.780
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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