STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07428.1Putative uncharacterized protein. (919 aa)    
Predicted Functional Partners:
CCG07429.1
Transglutaminase-like.
 
  
 0.985
CCG07425.1
Transglutaminase-like.
     0.900
CCG07427.1
Transglutaminase-like.
     0.894
CCG07426.1
Transglutaminase-like.
     0.885
CCG07974.1
Proteasome-type protease.
 
  
 0.793
CCG07104.1
Putative uncharacterized protein.
 
  
0.757
CCG07103.1
Putative uncharacterized protein.
 
  
0.721
CCG07430.1
Unnamed protein product.
       0.478
CCG07424.1
Response regulator containing a CheY-like receiver domain and a GGDEF domain.
       0.414
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.