STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07441.1UDP-glucose 6-dehydrogenase. (438 aa)    
Predicted Functional Partners:
CCG07625.1
DTDP-glucose 4,6 dehydratase.
 0.995
CCG07440.1
UDP-glucose pyrophosphorylase.
 
 0.993
CCG09128.1
UDP-glucuronate 5'-epimerase.
 0.970
CCG06590.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.891
CCG06587.1
Putative uncharacterized protein.
  
  
 0.886
CCG06615.1
Putative glycosyl transferase (Glycosyl transferase family 2).
  
  
 0.842
CCG07442.1
Phosphoglucomutase/phosphomannomutase.
     
 0.836
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase, putative.
  
  
 0.834
rmbA
Glucose-1-phosphate thymidylyltransferase.
  
  
 0.834
CCG09074.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.834
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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