STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07488.1TRAP-type C4-dicarboxylate transport system periplasmic component-like. (407 aa)    
Predicted Functional Partners:
CCG07489.1
Alpha/beta hydrolase fold.
       0.704
cowN
Putative uncharacterized protein; Is required to sustain N(2)-dependent growth in the presence of low levels of carbon monoxide (CO). Probably acts by protecting the N(2) fixation ability of the nitrogenase complex, which is inactivated in the presence of CO.
       0.604
betB
Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.577
CCG08890.1
Tripartite ATP-independent periplasmic transporter, DctQ component.
  
  
 0.512
CCG07021.1
Putative sulfonate/nitrate transport system substrate-binding protein.
 
   
 0.485
CCG09514.1
Putative uncharacterized protein.
  
  
 0.458
CCG07715.1
Long chain fatty acid CoA ligase.
 
     0.449
CCG06896.1
Ni,Fe-hydrogenase I large subunit.
  
   
 0.433
CCG07262.1
Putative uncharacterized protein.
  
     0.415
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.