STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07520.1Beta-glucosidase/6-phospho-beta-glucosidase/ beta-galactosidase. (480 aa)    
Predicted Functional Partners:
CCG09050.1
Glycoside hydrolase, family 3-like.
 
  
 0.936
CCG09051.1
Glycoside hydrolase, family 3-like.
 
  
 0.928
CCG08329.1
PfkB; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.880
CCG08291.1
Putative uncharacterized protein.
  
  
 0.818
CCG08328.1
Phosphoenolpyruvate--protein phosphotransferase.
  
  
 0.714
CCG08724.1
Putative uncharacterized protein.
    
 0.665
CCG08663.1
Ribose-5-phosphate isomerase.
  
  
 0.657
CCG07521.1
ABC-type uncharacterized transport system.
       0.594
CCG09594.1
Phage major capsid protein, HK97 family.
   
   0.565
CCG09595.1
Portal protein-like protein.
  
   0.536
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.