STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07527.1FAD linked oxidase-like. (490 aa)    
Predicted Functional Partners:
CCG07271.1
Electron transfer flavoprotein.
 
 
 0.659
CCG08021.1
Cytochrome c oxidase cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
   
 
 0.659
CCG07207.1
NAD-reducing hydrogenase diaphorase moiety largesubunit.
   
 
 0.650
CCG07270.1
Electron transfer flavoprotein beta-subunit.
 
 
 0.648
fixB
FixB.
 
 
 0.638
fixA
FixA.
  
 
 0.590
infC
Bacterial translation initiation factor 3 (BIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
       0.573
CCG06922.1
Malate dehydrogenase.
  
  
 0.563
CCG07093.1
Glutamate synthase (NADPH) large subunit.
     
 0.522
nifJ
Pyruvate-flavodoxin oxidoreductase.
   
 
 0.502
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.