STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07618.13-hydroxybutyrate dehydrogenase. (300 aa)    
Predicted Functional Partners:
CCG07693.1
Acetoacetyl-CoA synthase.
   
 0.924
CCG06792.1
Isopropylmalate/homocitrate/citramalate synthase.
  
 
 0.908
CCG07995.1
[Acyl-carrier-protein] S-malonyltransferase.
 
 
 0.692
phaZ2
PhaZ2.
  
   
 0.653
CCG06922.1
Malate dehydrogenase.
 
 
 0.603
CCG07619.1
Unnamed protein product.
       0.590
CCG08329.1
PfkB; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.587
CCG07991.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 
 0.581
CCG07992.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
 0.581
CCG07620.1
Zinc-containing alcohol dehydrogenase superfamily.
  
 
 0.577
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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