STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07667.1FeS assembly protein SufD. (426 aa)    
Predicted Functional Partners:
CCG07665.1
Iron-regulated ABC transporter membrane component SufB.
 
 0.999
CCG07666.1
FeS assembly ATPase SufC.
 
 0.999
CCG07668.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.996
CCG07669.1
Putative uncharacterized protein.
   
 0.981
CCG09457.1
Cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 0.978
CCG07670.1
HesB/YadR/YfhF; Belongs to the HesB/IscA family.
  
 
 0.905
CCG08096.1
Cysteine desulfuration protein SufE.
 
 
 0.840
CCG09158.1
NifQ protein.
  
  
 0.821
CCG07664.1
Transcriptional regulator, BadM/Rrf2 family.
 
   
 0.775
CCG07750.1
HesB/YadR/YfhF; Belongs to the HesB/IscA family.
  
 
 0.610
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.