STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07672.1Putative pterin-4-alpha-carbinolamine dehydratase. (146 aa)    
Predicted Functional Partners:
CCG07673.1
Putative uncharacterized protein.
       0.780
CCG07671.1
Putative uncharacterized protein.
       0.689
CCG09337.1
Lactoylglutathione lyase and related lyase.
  
  
 0.661
CCG08843.1
Putative uncharacterized protein.
  
  
 0.623
CCG07784.1
Polynucleotide adenylyltransferase region; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
 
      0.548
cbbZ
Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
  
  
 0.467
CCG07260.1
Endoribonuclease L-PSP.
  
    0.450
CCG07841.1
HAD-superfamily hydrolase, subfamily IA, variant 1.
  
  
 0.434
CCG08478.1
Haloacid dehalogenase-like hydrolase.
  
  
 0.434
CCG07789.1
Putative uncharacterized protein.
   
    0.432
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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