STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07682.1Zinc-containing alcohol dehydrogenase superfamily; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. (337 aa)    
Predicted Functional Partners:
CCG07734.1
Phenolpthiocerol synthesis polyketide synthase ppsA.
  
 
 0.653
hslU
ATP-dependent hsl protease ATP-binding subunit hslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.
  
  
 0.528
hslV
20S proteasome, A and B subunits; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.
       0.509
CCG09240.1
PepSY-associated TM helix.
  
     0.478
CCG06922.1
Malate dehydrogenase.
     
 0.454
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.445
CCG07154.1
Putative uncharacterized protein.
  
 
 0.420
CCG07207.1
NAD-reducing hydrogenase diaphorase moiety largesubunit.
  
  
 0.415
CCG09437.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.415
CCG08227.1
Major facilitator superfamily protein MFS_1.
  
  
 0.409
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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