STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07718.1Putative uncharacterized protein. (250 aa)    
Predicted Functional Partners:
CCG08152.1
Putative uncharacterized protein.
 
     0.629
CCG09815.1
Putative uncharacterized protein.
  
     0.617
CCG08371.1
AsmA.
  
     0.592
CCG07719.1
Putative uncharacterized protein.
       0.586
CCG07474.1
Putative uncharacterized protein.
  
     0.552
CCG09814.1
Putative uncharacterized protein.
  
     0.543
CCG07720.1
PfkB.
       0.481
CCG08396.1
Putative uncharacterized protein.
 
     0.480
CCG09826.1
Putative uncharacterized protein.
  
     0.470
CCG06954.1
Putative uncharacterized protein.
    
 
 0.444
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.