STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fixCFixC; Part of an electron transfer system. Belongs to the ETF-QO/FixC family. (433 aa)    
Predicted Functional Partners:
fixX
FixX; Could be a 3Fe-4S cluster-containing protein.
 
 
 0.987
fixA
FixA.
 
 
 0.970
fixB
FixB.
 
 
 0.968
nifW
NifW; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family.
 
  
 0.692
CCG07270.1
Electron transfer flavoprotein beta-subunit.
 
 
 0.680
CCG07271.1
Electron transfer flavoprotein.
 
 
 0.660
CCG08027.1
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
 
 
0.601
CCG06939.1
Leucine rich repeat variant.
  
    0.556
CCG06936.1
Putative uncharacterized protein.
 
    0.492
CCG06937.1
NifT/FixU.
 
    0.488
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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