Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CCG06669.1 | CCG07756.1 | RSPPHO_00043 | RSPPHO_01130 | Lipoprotein releasing system, transmembrane protein, LolC/E family. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.944 |
| CCG06669.1 | CCG09191.1 | RSPPHO_00043 | RSPPHO_02565 | Lipoprotein releasing system, transmembrane protein, LolC/E family. | ABC transporter component. | 0.961 |
| CCG06669.1 | lolD1 | RSPPHO_00043 | RSPPHO_00042 | Lipoprotein releasing system, transmembrane protein, LolC/E family. | Lipoprotein-releasing system ATP-binding protein lolD 1; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. | 0.999 |
| CCG06669.1 | lptD | RSPPHO_00043 | RSPPHO_01107 | Lipoprotein releasing system, transmembrane protein, LolC/E family. | Organic solvent tolerance protein OstA-like; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.410 |
| CCG07534.1 | CCG07756.1 | RSPPHO_00908 | RSPPHO_01130 | SmpA/OmlA. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.760 |
| CCG07534.1 | CCG08764.1 | RSPPHO_00908 | RSPPHO_02138 | SmpA/OmlA. | Putative uncharacterized protein. | 0.663 |
| CCG07534.1 | CCG09356.1 | RSPPHO_00908 | RSPPHO_02730 | SmpA/OmlA. | UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. | 0.438 |
| CCG07534.1 | CCG09520.1 | RSPPHO_00908 | RSPPHO_02894 | SmpA/OmlA. | Putative uncharacterized protein. | 0.578 |
| CCG07534.1 | lptD | RSPPHO_00908 | RSPPHO_01107 | SmpA/OmlA. | Organic solvent tolerance protein OstA-like; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.573 |
| CCG07534.1 | rnpA | RSPPHO_00908 | RSPPHO_01808 | SmpA/OmlA. | Ribonuclease P protein; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.528 |
| CCG07756.1 | CCG06669.1 | RSPPHO_01130 | RSPPHO_00043 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Lipoprotein releasing system, transmembrane protein, LolC/E family. | 0.944 |
| CCG07756.1 | CCG07534.1 | RSPPHO_01130 | RSPPHO_00908 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | SmpA/OmlA. | 0.760 |
| CCG07756.1 | CCG08764.1 | RSPPHO_01130 | RSPPHO_02138 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Putative uncharacterized protein. | 0.807 |
| CCG07756.1 | CCG09111.1 | RSPPHO_01130 | RSPPHO_02485 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Putative uncharacterized protein. | 0.721 |
| CCG07756.1 | CCG09191.1 | RSPPHO_01130 | RSPPHO_02565 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | ABC transporter component. | 0.739 |
| CCG07756.1 | CCG09356.1 | RSPPHO_01130 | RSPPHO_02730 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. | 0.718 |
| CCG07756.1 | CCG09520.1 | RSPPHO_01130 | RSPPHO_02894 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Putative uncharacterized protein. | 0.706 |
| CCG07756.1 | lolD1 | RSPPHO_01130 | RSPPHO_00042 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Lipoprotein-releasing system ATP-binding protein lolD 1; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. | 0.739 |
| CCG07756.1 | lptD | RSPPHO_01130 | RSPPHO_01107 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Organic solvent tolerance protein OstA-like; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.685 |
| CCG07756.1 | rnpA | RSPPHO_01130 | RSPPHO_01808 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Ribonuclease P protein; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.681 |
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