STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07824.1Surface antigen. (681 aa)    
Predicted Functional Partners:
CCG07827.1
Putative uncharacterized protein.
 
 
 0.992
CCG07825.1
Putative uncharacterized protein.
 
 
 0.989
CCG09603.1
Putative uncharacterized protein.
 
 
 0.829
CCG07823.1
Putative uncharacterized protein.
       0.773
CCG07826.1
Putative uncharacterized protein.
       0.773
CCG06575.1
Serine-threonine protein kinase.
  
 
 0.738
CCG07822.1
ABC transporter component.
  
    0.582
CCG07821.1
Amino acid ABC transporter, permease protein,3-TM region, His/Glu/Gln/Arg/opine.
  
    0.563
artI
Arginine-binding periplasmic protein 1.
       0.555
CCG06980.1
Glyoxalase family protein.
   
    0.533
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.