Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCG06922.1 | cobB | RSPPHO_00296 | RSPPHO_02724 | Malate dehydrogenase. | NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. | 0.659 |
CCG06922.1 | ispDF | RSPPHO_00296 | RSPPHO_01955 | Malate dehydrogenase. | Bifunctional enzyme ispD/ispF; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF). | 0.475 |
CCG06922.1 | nadK | RSPPHO_00296 | RSPPHO_01259 | Malate dehydrogenase. | NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.682 |
CCG06922.1 | plsX | RSPPHO_00296 | RSPPHO_00905 | Malate dehydrogenase. | Fatty acid/phospholipid synthesis protein plsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | 0.530 |
CCG06922.1 | pntAB | RSPPHO_00296 | RSPPHO_01091 | Malate dehydrogenase. | NAD(P) transhydrogenase subunit alpha part 2. | 0.446 |
CCG07836.1 | cobB | RSPPHO_01210 | RSPPHO_02724 | MazG. | NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. | 0.903 |
CCG07836.1 | nadD | RSPPHO_01210 | RSPPHO_01894 | MazG. | Cytidylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.907 |
CCG07836.1 | nadE | RSPPHO_01210 | RSPPHO_00651 | MazG. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.902 |
CCG07836.1 | nadK | RSPPHO_01210 | RSPPHO_01259 | MazG. | NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.903 |
CCG07836.1 | pntAB | RSPPHO_01210 | RSPPHO_01091 | MazG. | NAD(P) transhydrogenase subunit alpha part 2. | 0.902 |
CCG07836.1 | pntB | RSPPHO_01210 | RSPPHO_01090 | MazG. | NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.904 |
CCG08076.1 | nadK | RSPPHO_01450 | RSPPHO_01259 | Hemolysin A. | NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.614 |
cobB | CCG06922.1 | RSPPHO_02724 | RSPPHO_00296 | NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. | Malate dehydrogenase. | 0.659 |
cobB | CCG07836.1 | RSPPHO_02724 | RSPPHO_01210 | NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. | MazG. | 0.903 |
cobB | nadD | RSPPHO_02724 | RSPPHO_01894 | NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. | Cytidylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.944 |
cobB | nadE | RSPPHO_02724 | RSPPHO_00651 | NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.959 |
cobB | nadK | RSPPHO_02724 | RSPPHO_01259 | NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. | NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.923 |
cobB | pntAB | RSPPHO_02724 | RSPPHO_01091 | NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. | NAD(P) transhydrogenase subunit alpha part 2. | 0.910 |
cobB | pntB | RSPPHO_02724 | RSPPHO_01090 | NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. | NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.903 |
ispDF | CCG06922.1 | RSPPHO_01955 | RSPPHO_00296 | Bifunctional enzyme ispD/ispF; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF). | Malate dehydrogenase. | 0.475 |
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