STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07934.1GGDEF domain. (199 aa)    
Predicted Functional Partners:
CCG09448.1
Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain.
  
 0.939
CCG08276.1
Response regulator containing a CheY-like receiver domain and an HD-GYP domain.
  
 0.936
CCG07361.1
Response regulator containing a CheY-like receiver domain and an HD-GYP domain.
  
 0.932
CCG06763.1
Two component transcriptional regulator, winged helix family.
 
 
    0.901
CCG07460.1
Predicted signal transduction protein.
  
 0.845
CCG06691.1
Putative diguanylate phosphodiesterase (EAL domain).
  
 0.832
CCG08836.1
Hypothetical 1041 kDa protein in hypE 3'region.
 
  
 0.817
CCG09392.1
Diguanylate cyclase/phosphodiesterase.
  
 0.800
CCG08701.1
Response regulator receiver modulated diguanylate cyclase.
 
  
 0.790
CCG07942.1
HD-GYP domain.
 
 0.646
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.