STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07939.1Polyhydroxyalkanoate synthesis repressor PhaR. (206 aa)    
Predicted Functional Partners:
CCG09045.1
Alpha/beta hydrolase fold.
 
   
 0.796
phbC
Poly-beta-hydroxybutyrate polymerase.
 
   
 0.779
CCG08779.1
Poly(R)-hydroxyalkanoic acid synthase, class I.
 
   
 0.776
phaZ2
PhaZ2.
 
   
 0.755
CCG09047.1
3-oxoacyl-[acyl-carrier-protein] reductase.
 
   
 0.550
CCG07147.1
UPF0262 protein Rru_A2770; Belongs to the UPF0262 family.
  
     0.514
recR
Recombination protein recR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.453
CCG06708.1
Methylmalonyl-CoA mutase.
     
 0.401
CCG09053.1
Methylmalonyl-CoA mutase.
     
 0.401
CCG09054.1
Methylmalonyl-CoA mutase.
     
 0.401
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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