STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
r-adhAlcohol dehydrogenase; Name=r-adh. (403 aa)    
Predicted Functional Partners:
CCG07981.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.984
CCG07953.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.946
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.765
CCG07588.1
Aldehyde dehydrogenase (Acceptor).
 
 
 0.727
CCG07194.1
Anaerobic ribonucleoside-triphosphate reductase activating protein.
  
  
 0.710
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.708
CCG07605.1
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
  
 0.685
CCG09530.1
Glycerol dehydrogenase.
 
  
 0.631
CCG09437.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.598
betB
Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.560
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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