STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08055.1VacJ-like lipoprotein. (546 aa)    
Predicted Functional Partners:
CCG07142.1
Mammalian cell entry related.
 
   
 0.803
CCG07143.1
Mammalian cell entry related.
 
   
 0.792
CCG06879.1
Toluene tolerance.
 
 
 
 0.783
por39a
Porin 39 (Por39)a.
 
 
 
 0.753
por39b
Porin 39 (Por39)b.
 
 
 
 0.744
CCG08054.1
Toluene tolerance.
 
 
 
 0.686
CCG07510.1
OmpA family protein.
  
  
 0.610
CCG08151.1
Peptidoglycan glycosyltransferase.
 
     0.577
CCG08046.1
ABC transporter component.
 
   
 0.563
CCG08153.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
     0.560
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.