STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08138.1Ankyrin. (240 aa)    
Predicted Functional Partners:
CCG08902.1
Type II secretion system protein E.
  
 
 0.792
CCG08901.1
Type II secretion system protein.
  
  
 0.755
CCG08136.1
RNA methyltransferase TrmH, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
       0.573
CCG08137.1
GCN5-related N-acetyltransferase.
       0.567
CCG08139.1
Putative uncharacterized protein; Belongs to the BI1 family.
  
  
 0.457
CCG09584.1
Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
  
  
 0.452
CCG07763.1
SMF protein.
  
  
 0.448
CCG08267.1
Putative uncharacterized protein.
  
  
 0.448
CCG07812.1
ComEC/Rec2-related protein.
  
  
 0.440
CCG08010.1
Flagellar basal-body rod protein FlgC.
    
   0.408
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.