STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08145.1Response regulator. (509 aa)    
Predicted Functional Partners:
CCG06763.1
Two component transcriptional regulator, winged helix family.
 
 
  
 0.868
CCG07460.1
Predicted signal transduction protein.
 
 0.856
CCG06691.1
Putative diguanylate phosphodiesterase (EAL domain).
  
 0.823
CCG08276.1
Response regulator containing a CheY-like receiver domain and an HD-GYP domain.
  
 0.799
CCG08836.1
Hypothetical 1041 kDa protein in hypE 3'region.
 
  
 0.781
CCG07361.1
Response regulator containing a CheY-like receiver domain and an HD-GYP domain.
  
 0.768
CCG09448.1
Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain.
  
 0.692
CCG07942.1
HD-GYP domain.
 
 0.675
CCG09364.1
Sensor protein.
  
 
 0.630
CCG06907.1
Diguanylate cyclase/phosphodiesterase.
 
  
 0.629
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.