STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08160.1Alpha/beta hydrolase fold. (398 aa)    
Predicted Functional Partners:
CCG08161.1
Sensor protein.
       0.773
CCG08509.1
Putative uncharacterized protein.
 
 
   0.663
CCG08381.1
ETC complex I subunit conserved region.
  
     0.575
CCG08981.1
Putative phytoene synthase protein.
 
   
 0.542
CCG09006.1
Glycosyl transferase, family 25.
  
     0.523
CCG07294.1
Glycosyl transferase, family 25.
  
     0.518
CCG09408.1
Serine/threonine protein kinase.
 
     0.499
CCG07735.1
Putative uncharacterized protein.
  
 
 0.470
acpP
Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.470
CCG09355.1
Putative uncharacterized protein.
  
 
 0.470
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.