STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08202.1Transcriptional regulator, BadM/Rrf2 family. (195 aa)    
Predicted Functional Partners:
CCG08728.1
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzyme.
 
  
 0.956
CCG09193.1
Aminotransferase, class V.
 
  
 0.941
CCG08201.1
Serine O-acetyltransferase.
     
 0.800
CCG08200.1
Putative uncharacterized protein.
       0.621
CCG07670.1
HesB/YadR/YfhF; Belongs to the HesB/IscA family.
  
  
 0.597
CCG08744.1
Ferredoxin.
  
  
 0.513
CCG09158.1
NifQ protein.
  
  
 0.501
CCG09077.1
Predicted transcriptional regulator.
  
   
 0.448
CCG07025.1
Putative uncharacterized protein.
  
  
 0.435
CCG08387.1
RNA methyltransferase TrmH, group 1.
      0.431
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.