STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08215.1ATPase involved in chromosome partitioning,putative. (212 aa)    
Predicted Functional Partners:
CCG08214.1
RepA.
   
 0.956
CCG08216.1
Putative uncharacterized protein.
 
     0.949
CCG08217.1
Putative uncharacterized protein.
 
     0.905
CCG08218.1
Conjugal transfer protein.
     0.900
CCG08213.1
Putative uncharacterized protein.
 
     0.884
CCG07698.1
Chromosome segregation DNA-binding protein; Belongs to the ParB family.
 
 
 0.858
CCG08212.1
Putative uncharacterized protein.
 
     0.757
CCG08221.1
Putative uncharacterized protein.
     0.754
CCG09745.1
Cobyrinic acid a,c-diamide synthase.
  
   
 0.752
CCG06965.1
ParB domain protein nuclease.
 
 
 0.718
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.