STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08232.1Helix-turn-helix protein, CopG. (149 aa)    
Predicted Functional Partners:
CCG08231.1
TRAG protein.
 
     0.942
CCG08229.1
Putative uncharacterized protein.
 
     0.878
CCG08213.1
Putative uncharacterized protein.
 
   
 0.792
CCG08217.1
Putative uncharacterized protein.
 
     0.789
CCG08221.1
Putative uncharacterized protein.
 
     0.787
CCG08235.1
Conjugal transfer protein.
 
     0.786
CCG08237.1
Conjugal transfer protein.
 
     0.784
CCG08218.1
Conjugal transfer protein.
 
     0.783
CCG08214.1
RepA.
 
     0.779
CCG08240.1
Conjugal transfer protein trbL.
 
     0.779
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.