STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08240.1Conjugal transfer protein trbL. (286 aa)    
Predicted Functional Partners:
CCG08239.1
P-type conjugative transfer protein TrbL.
     0.994
CCG08609.1
P-type conjugative transfer protein TrbL.
 
     0.976
CCG08241.1
Conjugal transfer protein.
   
 0.972
CCG08242.1
P-type conjugative transfer protein TrbG.
   
 0.970
CCG08243.1
Conjugation TrbI family protein.
 
   
 0.962
CCG08244.1
Putative uncharacterized protein.
 
     0.952
CCG08237.1
Conjugal transfer protein.
 
   
 0.946
CCG08238.1
Putative uncharacterized protein.
 
     0.946
CCG08236.1
Conjugal transfer protein.
 
   
 0.944
CCG08234.1
Conjugal transfer protein TrbC.
 
   
 0.942
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.