STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08290.1Putative phenylacetate-CoA ligase. (426 aa)    
Predicted Functional Partners:
CCG07201.1
Phenylacetate--CoA ligase.
  
  
 
0.927
CCG08038.1
Phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
  
  
 
0.926
CCG07001.1
Putative branched-chain amino acid transport system substrate-binding protein.
 
    0.809
CCG07004.1
AMP-dependent synthetase and ligase.
 
    0.786
CCG07000.1
ABC transporter component.
 
    0.768
CCG07005.1
ABC transporter component.
 
    0.755
CCG07308.1
Phenylacetic acid degradation protein.
 
  
 0.755
CCG07002.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.679
CCG07003.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.546
CCG09686.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.493
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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