STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08294.1Uncharacterized protein conserved in bacteria. (488 aa)    
Predicted Functional Partners:
CCG08293.1
Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain.
 
     0.921
CCG07193.1
Response regulator receiver domain protein.
  
     0.767
CCG09091.1
Putative uncharacterized protein.
  
     0.746
CCG08500.1
Putative uncharacterized protein.
  
     0.744
CCG06673.1
Flagellar hook-length control protein.
  
     0.731
CCG08251.1
Putative uncharacterized protein.
  
     0.721
CCG09536.1
Putative uncharacterized protein.
  
     0.717
CCG08499.1
Putative uncharacterized protein.
  
     0.707
CCG06734.1
Putative uncharacterized protein.
  
     0.706
CCG06822.1
Putative uncharacterized protein.
  
     0.678
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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