STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08296.1ABC transporter component. (316 aa)    
Predicted Functional Partners:
CCG08829.1
ABC transporter, permease protein, putative.
 
  
 0.897
CCG09834.1
ABC-2 transporter component.
  
 0.869
CCG08297.1
Alpha/beta hydrolase fold.
     
 0.840
CCG08295.1
Putative uncharacterized protein.
       0.683
CCG08483.1
ABC-2 transporter component.
  
 0.646
CCG09431.1
ABC transporter component.
    
0.625
CCG08046.1
ABC transporter component.
    
0.593
CCG09430.1
ABC transporter component.
 
    
0.566
CCG08298.1
GMP synthase-Glutamine amidotransferase domain.
     
 0.476
atpD
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.473
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.