STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08318.1ABC transporter component. (524 aa)    
Predicted Functional Partners:
CCG08316.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
CCG08317.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
CCG08315.1
Basic membrane lipoprotein.
 
 
 0.994
CCG09377.1
Basic membrane protein, putative.
 
 0.984
CCG09393.1
Twin-arginine translocation pathway signal.
 
 0.984
AraZ
Ribose/xylose/arabinose/galactoside ABC-type transport system permease component.
 
     0.930
CCG09758.1
ABC-type sugar transport system, periplasmic component.
 
     0.516
CCG09450.1
Putative sugar uptake ABC transporter periplasmic solute-binding protein.
 
     0.476
CCG08319.1
Protein-methionine-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
       0.475
CCG07002.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
      0.435
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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