STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08339.1Transposase; Required for the transposition of the insertion element. (291 aa)    
Predicted Functional Partners:
CCG07674.1
Transposase, mutator type; Required for the transposition of the insertion element.
  
     0.763
CCG08336.1
Putative uncharacterized protein.
 
     0.570
CCG08337.1
Putative uncharacterized protein.
       0.493
CCG08338.1
Putative uncharacterized protein.
       0.493
CCG08340.1
Transposase IS4 family protein.
  
     0.435
CCG09103.1
Transposase, mutator type; Required for the transposition of the insertion element.
  
     0.410
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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