STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08349.1Type II and III secretion system protein; Belongs to the bacterial secretin family. (626 aa)    
Predicted Functional Partners:
CCG08348.1
Putative uncharacterized protein.
 
  
 0.958
CCG08901.1
Type II secretion system protein.
 
  
 0.872
CCG08902.1
Type II secretion system protein E.
 
  
 0.835
CCG08350.1
Peptidase A24A, prepilin type IV.
       0.773
CCG06735.1
ATPase FliI/YscN.
  
  
 0.639
CCG08963.1
Type II secretion system protein E.
 
   
 0.635
CCG08897.1
Surface presentation of antigens (SPOA) protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
  
  
 0.544
CCG09669.1
Surface presentation of antigens (SPOA) protein.
  
  
 0.544
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
    0.526
flhB-2
Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
  
 
 0.523
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.