STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08361.1Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. (408 aa)    
Predicted Functional Partners:
CCG08362.1
Sensor protein.
 
 
 
 0.967
CCG06740.1
CheA Signal Transduction Histidine Kinases (STHK).
  
 
 0.948
CCG09364.1
Sensor protein.
 
 
 
 0.918
CCG08172.1
Sensor protein.
 
 
 
 0.893
CCG09068.1
Sensor protein.
 
 
 
 0.884
CCG08326.1
Sensor protein.
   
 
 0.879
CCG08360.1
Response regulator containing a CheY-like receiver domain and an HD-GYP domain.
 
   
0.876
CCG08277.1
Sensor protein.
 
 
 
 0.873
CCG09501.1
Sensor protein.
 
 
 
 0.865
CCG06830.1
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
 
 0.854
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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