STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08427.1Double-transmembrane region-like. (165 aa)    
Predicted Functional Partners:
CCG07790.1
Double-transmembrane region-like.
 
     0.976
CCG06565.1
Double-transmembrane region-like.
 
     0.976
CCG07789.1
Putative uncharacterized protein.
 
    0.802
CCG06717.1
Putative uncharacterized protein.
 
     0.799
CCG06718.1
Putative uncharacterized protein.
 
     0.785
CCG06709.1
Putative uncharacterized protein.
  
    0.778
CCG07788.1
ATPase associated with various cellular activities, AAA_3.
 
     0.670
CCG08028.1
TPR repeat.
  
     0.598
CCG07685.1
Transcriptional regulator, XRE family.
  
   
 0.596
CCG09826.1
Putative uncharacterized protein.
  
     0.562
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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