STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08444.1Transcriptional regulator, BadM/Rrf2 family. (148 aa)    
Predicted Functional Partners:
CCG09193.1
Aminotransferase, class V.
  
  
 0.788
CCG07664.1
Transcriptional regulator, BadM/Rrf2 family.
  
     0.718
CCG07670.1
HesB/YadR/YfhF; Belongs to the HesB/IscA family.
 
  
 0.659
CCG08728.1
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzyme.
  
  
 0.580
CCG08443.1
Putative uncharacterized protein.
       0.563
CCG08744.1
Ferredoxin.
  
  
 0.513
CCG09158.1
NifQ protein.
  
  
 0.501
CCG07025.1
Putative uncharacterized protein.
  
  
 0.435
CCG07572.1
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
   
   0.428
CCG09184.1
4Fe-4S ferredoxin, iron-sulfur binding.
  
  
 0.420
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.