STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08463.1Putative uncharacterized protein. (450 aa)    
Predicted Functional Partners:
CCG09594.1
Phage major capsid protein, HK97 family.
   
 
 0.586
CCG07417.1
Peptidase M10A and M12B, matrixin and adamalysin.
   
   0.528
CCG09595.1
Portal protein-like protein.
  
 
 0.490
CCG07520.1
Beta-glucosidase/6-phospho-beta-glucosidase/ beta-galactosidase.
   
   0.455
CCG08936.1
Putative outer membrane secretion protein-like protein.
   
   0.452
CCG08975.1
Phage terminase GpA.
  
  
 0.440
CCG08462.1
Unnamed protein product.
       0.420
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.