STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08506.1Extracellular solute-binding protein, family 1. (350 aa)    
Predicted Functional Partners:
potA-2
ABC transporter component; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 0.996
CCG08507.1
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.996
CCG08508.1
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.995
CCG09466.1
Binding-protein-dependent transport systems inner membrane component.
 
  
 0.662
CCG09467.1
ABC-type spermidine/putrescine transport system.
 
  
 0.654
CCG06862.1
Binding-protein-dependent transport systems inner membrane component.
  
  
 0.612
CCG06861.1
Binding-protein-dependent transport systems inner membrane component.
  
  
 0.608
potA
Spermidine/putrescine ABC transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  
 0.605
potG
ABC transporter, nucleotide binding/ATPase protein; Belongs to the ABC transporter superfamily.
 
  
 0.605
CCG07392.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.428
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.