STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08531.1ArgK protein. (251 aa)    
Predicted Functional Partners:
CCG06708.1
Methylmalonyl-CoA mutase.
 
  
 0.967
CCG09054.1
Methylmalonyl-CoA mutase.
 
  
 0.967
CCG09053.1
Methylmalonyl-CoA mutase.
 
  
 0.965
CCG09337.1
Lactoylglutathione lyase and related lyase.
   
 0.808
glyS
Glycyl-tRNA synthetase beta subunit.
       0.550
CCG08532.1
Permease YjgP/YjgQ.
       0.526
CCG08533.1
ABC transporter, transmembrane region.
       0.526
CCG08529.1
Pyruvate phosphate dikinase.
       0.522
ppdK
PYRUVATE,PHOSPHATE DIKINASE.
       0.522
glyQ
Glycyl-tRNA synthetase alpha subunit.
       0.500
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.