STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08541.1Copper-translocating P-type ATPase. (828 aa)    
Predicted Functional Partners:
CCG08540.1
Integral membrane protein linked to a cation pump-like.
 
  
 0.862
CCG08021.1
Cytochrome c oxidase cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
   
 0.835
CCG08539.1
4Fe-4S ferredoxin, iron-sulfur binding.
 
     0.828
CCG08019.1
Cytochrome C oxidase, mono-heme subunit/FixO.
 
   
 0.818
CCG08542.1
Cytochrome oxidase maturation protein cbb3-type.
 
  
 0.818
CCG08018.1
Cytochrome c oxidase cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.810
CCG08842.1
Putative uncharacterized protein.
  
 
 0.747
CCG08543.1
Transcriptional regulator, Crp/Fnr family.
     
 0.643
CCG08544.1
DNA polymerase III, chi subunit.
       0.547
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.534
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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